57 entries « 2 of 3 »

Francescatto, Margherita; Chierici, Marco; Dezfooli, Setareh Rezvan; Zandon`a, Alessandro; Jurman, Giuseppe; Furlanello, Cesare

Multi-omics integration for neuroblastoma clinical endpoint prediction Journal Article

In: Biology direct, vol. 13, no. 1, pp. 5, 2018.



Melaiu, Ombretta; Mina, Marco; Chierici, Marco; Boldrini, Renata; Jurman, Giuseppe; Romania, Paolo; D’Alicandro, Valerio; Benedetti, Maria C; Castellano, Aurora; Liu, Tao; others,

PD-L1 is a therapeutic target of the bromodomain inhibitor JQ1 and, combined with HLA class I, a promising prognostic biomarker in neuroblastoma Journal Article

In: Clinical Cancer Research, vol. 23, no. 15, pp. 4462–4472, 2017.



Gnani, Daniela; Romito, Ilaria; Artuso, Simona; Chierici, Marco; Stefanis, Cristiano De; Panera, Nadia; Crudele, Annalisa; Ceccarelli, Sara; Carcarino, Elena; D’Oria, Valentina; Porru, Manuela; Giorda, Ezio; Ferrari, Karin; Miele, Luca; Villa, Erica; Balsano, Clara; Pasini, Diego; Furlanello, Cesare; Locatelli, Franco; Nobili, Valerio; Rota, Rossella; Leonetti, Carlo; Alisi, Anna

Focal adhesion kinase depletion reduces human hepatocellular carcinoma growth by repressing enhancer of zeste homolog Journal Article

In: Cell Death and Differentiation, vol. 24, pp. 889–902, 2017.



Mortera, Stefano Levi; Chierico, Federica Del; Vernocchi, Pamela; Rosado, Maria M; Cavola, Agnese; Chierici, Marco; Pieroni, Luisa; Urbani, Andrea; Carsetti, Rita; Lante, Isabella; others,

Monitoring perinatal gut microbiota in mouse models by mass spectrometry approaches: parental genetic background and breastfeeding effects Journal Article

In: Frontiers in Microbiology, vol. 7, 2016.



Hurst, Laurence D; Ghanbarian, Avazeh T; Forrest, Alistair RR; consortium, FANTOM; Huminiecki, Lukasz

The constrained maximal expression level owing to haploidy shapes gene content on the mammalian X chromosome Journal Article

In: PLoS biology, vol. 13, no. 12, pp. e1002315, 2015.



Zhang, Wenqian; Yu, Ying; Hertwig, Falk; Thierry-Mieg, Jean; Zhang, Wenwei; Thierry-Mieg, Danielle; Wang, Jian; Furlanello, Cesare; Devanarayan, Viswanath; Cheng, Jie; others,

Comparison of RNA-seq and microarray-based models for clinical endpoint prediction Journal Article

In: Genome biology, vol. 16, no. 1, pp. 133, 2015.



Mariano, Marilena De; Gallesio, Roberta; Chierici, Marco; Furlanello, Cesare; Conte, Massimo; Garaventa, Alberto; Croce, Michela; Ferrini, Silvano; Tonini, Gian Paolo; Longo, Luca

Identification of GALNT14 as a novel neuroblastoma predisposition gene Journal Article

In: Oncotarget, vol. 6, no. 28, pp. 26335, 2015.



Mariano, M. De; Gallesio, R.; Chierici, M.; Furlanello, C.; Conte, M.; Garaventa, A.; Tonini, G. P.; Longo, L.

GALNT14 as a novel candidate gene for neuroblastoma predisposition Conference

Advances in Neuroblastoma Research Association, 2014.



Gallesio, R.; Mariano, M. De; Chierici, M.; Stigliani, S.; Scaruffi, P.; Coco, S.; Furlanello, C.; Longo, L.; Tonini, G. P.

Exome sequencing suggests candidate genes associated with aggressiveness of stage 4 neuroblastoma patients Conference

Advances in Neuroblastoma Research Association, 2014.



Wang, C.; Gong, B.; Bushel, P. R.; Thierry-Mieg, J.; Thierry-Mieg, D.; Xu, J.; Fang, H.; Hong, H.; Shen, J.; Su, Z.; Meehan, J.; Li, X.; Yang, L.; Li, H.; Labaj, P. P.; Krell, D. P.; Megherbi, D.; Gaj, S.; Calment, F.; Delft, J.; Kleinjans, J.; Sherer, A.; Devanarayan, V.; Wang, J.; Yang, Y.; Qian, H. -R.; Lancashire, L. J.; Bessarabova, M.; Nikolsky, Y.; Furlanello, C.; Chierici, M.; Albanese, D.; Jurman, G.; Riccadonna, S.; Filosi, M.; Visintainer, R.; Zhang, K. K.; Li, J.; Hsieh, J. -H.; Svoboda, D. L.; Fuscoe, J. C.; Deng, Y.; Shi, L.; Paules, R. S.; Auerbach, S. S.; W., Tong

The concordance between RNA-Seq and microarray data depends on chemical treatment and transcript abundance Journal Article

In: Nature Biotechnology, 2014.



Consortium, The SEQC/MAQC-III

A comprehensive assessment of RNA-Seq accuracy, reproducibility and information content by the Sequencing Quality Control Consortium Journal Article

In: Nature Biotechnology, 2014.



Consortium, The FANTOM

A promoter-level mammalian expression atlas Journal Article

In: Nature, vol. 507, pp. 462-470, 2014.



Corneo, P. E.; Pellegrini, A.; Cappellin, L.; Roncador, M.; Chierici, M.; Gessler, C.; Pertot, I.

Microbial community structure in vineyard soils across altitudinal gradients and in different seasons Journal Article

In: FEMS Microbiology Ecology, vol. 84, no. 3, pp. 588-602, 2013.



Longo, L.; Mariano, M. De; Chierici, M.; Roncador, M.; Furlanello, C.; Tonini, G. P.

Identification of familial neuroblastoma associated genes by whole exome sequencing Conference

Advances in Neuroblastoma Research Association, 2012.



Chierici, M.; Albanese, D.; Franceschi, P.; Furlanello, C.

TOFwave: Reproducibility in Biomarker Discovery from time-of-flight Mass Spectrometry Data Journal Article

In: Molecular Biosystems, vol. 8, pp. 2845-2849, 2012.



Chierici, M.; Jurman, G.; Roncador, M.; Furlanello, C.

Single-base mismatch profiles for next-generation sequencing samples Miscellaneous

2011, (Preprint (arXiv:1109.1108)).



Roncador, M.; Chierici, M.; Filosi, M.; Visintainer, R.; Jurman, G.; Furlanello, C.

Developing pipelines for predictive biomarkers from metagenomics next-generation sequencing data Conference

International Conference on Environmental OMICS, Guangzhou, 2011.



Gandolfi, F.; Tagliazucchi, G. Malagoli; Albanese, D.; Chierici, M.; Furlanello, C.; Bicciato, S.

A wavelet-based approach for the analysis of exon-array data Conference

BITS, 2011.



Chierici, M.; Miclaus, K.; Vega, S.; Furlanello, C.

An interactive effect of batch size and composition contributes to discordant results in GWAS with the CHIAMO genotyping algorithm Journal Article

In: The Pharmacogenomics Journal, vol. 10, no. 4, pp. 355–363, 2010.



Miclaus, K.; Wolfinger, R.; Vega, S.; Chierici, M.; Furlanello, C.; Lambert, C.; Hong, H.; Zhang, L.; Yin, S.; Goodsaid, F.

Batch effects in the BRLMM genotype calling algorithm influence GWAS results for the Affymetrix 500K array Journal Article

In: The Pharmacogenomics Journal, vol. 10, no. 4, pp. 336–346, 2010.


57 entries « 2 of 3 »